Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ift88Q61371 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ift88Q61371 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ift88Q61371 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ift88Q61371 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ift88Q61371 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ift88Q61371 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Ift88Q61371 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ift88Q61371 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ift88Q61371 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ift88Q61371 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ift88Q61371 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.88□□□□□ -0.19
Ift88Q61371 Gm12091-201ENSMUST00000146791 830 ntBASIC13.88□□□□□ -0.19
Ift88Q61371 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ift88Q61371 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.88□□□□□ -0.19
Ift88Q61371 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ift88Q61371 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ift88Q61371 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ift88Q61371 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.88□□□□□ -0.19
Ift88Q61371 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ift88Q61371 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ift88Q61371 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ift88Q61371 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.88□□□□□ -0.19
Ift88Q61371 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ift88Q61371 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ift88Q61371 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Ift88Q61371 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ift88Q61371 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ift88Q61371 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ift88Q61371 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ift88Q61371 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.88□□□□□ -0.19
Ift88Q61371 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.87□□□□□ -0.19
Ift88Q61371 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.87□□□□□ -0.19
Ift88Q61371 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.87□□□□□ -0.19
Ift88Q61371 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.87□□□□□ -0.19
Ift88Q61371 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.87□□□□□ -0.19
Ift88Q61371 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 Gm12203-201ENSMUST00000118235 598 ntBASIC13.87□□□□□ -0.19
Ift88Q61371 Gm12209-201ENSMUST00000120089 596 ntBASIC13.87□□□□□ -0.19
Ift88Q61371 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.87□□□□□ -0.19
Ift88Q61371 Gm8227-201ENSMUST00000223306 571 ntBASIC13.87□□□□□ -0.19
Ift88Q61371 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.87□□□□□ -0.19
Ift88Q61371 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ift88Q61371 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.87□□□□□ -0.19
Ift88Q61371 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ift88Q61371 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Ift88Q61371 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ift88Q61371 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ift88Q61371 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.86□□□□□ -0.19
Ift88Q61371 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.86□□□□□ -0.19
Ift88Q61371 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ift88Q61371 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.86□□□□□ -0.19
Ift88Q61371 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Gm24231-201ENSMUST00000104315 133 ntBASIC13.86□□□□□ -0.19
Ift88Q61371 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ift88Q61371 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.86□□□□□ -0.19
Ift88Q61371 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ift88Q61371 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.86□□□□□ -0.19
Ift88Q61371 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms