Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Gm23119-201ENSMUST00000158610 140 ntBASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Gm12419-201ENSMUST00000116649 636 ntBASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Gm25226-201ENSMUST00000158198 123 ntBASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Gm8756-201ENSMUST00000183250 929 ntBASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Gm9797-202ENSMUST00000218003 294 ntBASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Gm23272-201ENSMUST00000104053 129 ntBASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Gm20694-201ENSMUST00000176943 404 ntBASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Gm29808-201ENSMUST00000194419 468 ntBASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps13aQ5H8C4 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Gm12407-201ENSMUST00000180219 324 ntBASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Gm19931-201ENSMUST00000198920 368 ntBASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms