Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Brf2Q3UAW9 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.83□□□□□ -0.51
Brf2Q3UAW9 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Brf2Q3UAW9 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.83□□□□□ -0.51
Brf2Q3UAW9 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Gm15703-201ENSMUST00000120250 880 ntBASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Gm19184-201ENSMUST00000196798 928 ntBASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Brf2Q3UAW9 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Rmrp-201ENSMUST00000157463 271 ntBASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Gm38092-201ENSMUST00000195600 653 ntBASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Gm44124-201ENSMUST00000204159 472 ntBASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.82□□□□□ -0.52
Brf2Q3UAW9 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Brf2Q3UAW9 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.81□□□□□ -0.52
Brf2Q3UAW9 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms