Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Gm21769-201ENSMUST00000211922 111 ntBASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Khdc4Q3TCX3 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Khdc4Q3TCX3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Gm11978-201ENSMUST00000122315 466 ntBASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Gm2383-201ENSMUST00000181461 807 ntBASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Khdc4Q3TCX3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms