Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Ccbe1Q3MI99 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccbe1Q3MI99 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Gm22175-201ENSMUST00000175007 78 ntBASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Gm45612-201ENSMUST00000211320 160 ntBASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Btrc-209ENSMUST00000224478 2194 ntBASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ccbe1Q3MI99 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Ccbe1Q3MI99 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms