Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Gm13192-201ENSMUST00000101199 208 ntBASIC11.18□□□□□ -0.62
Chd8Q09XV5 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Gm11989-201ENSMUST00000117240 672 ntBASIC11.18□□□□□ -0.62
Chd8Q09XV5 Gm9095-201ENSMUST00000117607 881 ntBASIC11.18□□□□□ -0.62
Chd8Q09XV5 Gm14270-201ENSMUST00000118388 846 ntBASIC11.18□□□□□ -0.62
Chd8Q09XV5 Gm11362-201ENSMUST00000118838 850 ntBASIC11.18□□□□□ -0.62
Chd8Q09XV5 Gm10443-201ENSMUST00000119024 210 ntBASIC11.18□□□□□ -0.62
Chd8Q09XV5 Gm9097-201ENSMUST00000120514 880 ntBASIC11.18□□□□□ -0.62
Chd8Q09XV5 Gm14524-201ENSMUST00000121066 683 ntBASIC11.18□□□□□ -0.62
Chd8Q09XV5 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Gm21577-201ENSMUST00000190823 697 ntBASIC11.18□□□□□ -0.62
Chd8Q09XV5 Gm20802-201ENSMUST00000190832 698 ntBASIC11.18□□□□□ -0.62
Chd8Q09XV5 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Gm33707-201ENSMUST00000195135 569 ntBASIC11.18□□□□□ -0.62
Chd8Q09XV5 Gm20568-201ENSMUST00000197129 208 ntBASIC11.18□□□□□ -0.62
Chd8Q09XV5 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.17□□□□□ -0.62
Chd8Q09XV5 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Gm14639-201ENSMUST00000120850 866 ntBASIC11.17□□□□□ -0.62
Chd8Q09XV5 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Chd8Q09XV5 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Chd8Q09XV5 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.17□□□□□ -0.62
Chd8Q09XV5 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Acot6-202ENSMUST00000222921 3622 ntBASIC11.17□□□□□ -0.62
Chd8Q09XV5 Gm7701-201ENSMUST00000163185 1479 ntBASIC11.17□□□□□ -0.62
Chd8Q09XV5 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Gm15617-201ENSMUST00000118973 771 ntBASIC11.17□□□□□ -0.62
Chd8Q09XV5 Mir1905-201ENSMUST00000122779 82 ntBASIC11.17□□□□□ -0.62
Chd8Q09XV5 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC11.17□□□□□ -0.62
Chd8Q09XV5 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC11.17□□□□□ -0.62
Chd8Q09XV5 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC11.17□□□□□ -0.62
Chd8Q09XV5 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd8Q09XV5 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.16□□□□□ -0.62
Chd8Q09XV5 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Chd8Q09XV5 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms