Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gm8385-201ENSMUST00000058999 643 ntBASIC12.06□□□□□ -0.48
Hoxc4Q08624 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Acot6-202ENSMUST00000222921 3622 ntBASIC12.06□□□□□ -0.48
Hoxc4Q08624 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Hoxc4Q08624 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.05□□□□□ -0.48
Hoxc4Q08624 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.05□□□□□ -0.48
Hoxc4Q08624 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc4Q08624 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Mir7070-201ENSMUST00000183657 86 ntBASIC12.05□□□□□ -0.48
Hoxc4Q08624 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.05□□□□□ -0.48
Hoxc4Q08624 Gm17812-201ENSMUST00000204935 318 ntBASIC12.05□□□□□ -0.48
Hoxc4Q08624 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.05□□□□□ -0.48
Hoxc4Q08624 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.05□□□□□ -0.48
Hoxc4Q08624 Gm19208-201ENSMUST00000213861 912 ntBASIC12.05□□□□□ -0.48
Hoxc4Q08624 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc4Q08624 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc4Q08624 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxc4Q08624 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.04□□□□□ -0.48
Hoxc4Q08624 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Gm37666-201ENSMUST00000194110 866 ntBASIC12.04□□□□□ -0.48
Hoxc4Q08624 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Hoxc4Q08624 AY036118-201ENSMUST00000200021 923 ntBASIC12.04□□□□□ -0.48
Hoxc4Q08624 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.04□□□□□ -0.48
Hoxc4Q08624 Rps4l-202ENSMUST00000204242 789 ntBASIC12.04□□□□□ -0.48
Hoxc4Q08624 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.04□□□□□ -0.48
Hoxc4Q08624 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.04□□□□□ -0.48
Hoxc4Q08624 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.04□□□□□ -0.48
Hoxc4Q08624 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc4Q08624 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxc4Q08624 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.04□□□□□ -0.48
Hoxc4Q08624 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.04□□□□□ -0.48
Hoxc4Q08624 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc4Q08624 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.03□□□□□ -0.48
Hoxc4Q08624 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms