Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cux2P70298 Gm38151-201ENSMUST00000195085 289 ntBASIC20.13■□□□□ 0.81
Cux2P70298 Gm42433-201ENSMUST00000196806 940 ntBASIC20.13■□□□□ 0.81
Cux2P70298 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Cux2P70298 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Cux2P70298 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cux2P70298 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cux2P70298 Gm43334-201ENSMUST00000197740 1318 ntBASIC20.13■□□□□ 0.81
Cux2P70298 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC20.13■□□□□ 0.81
Cux2P70298 AC137842.1-201ENSMUST00000227896 2064 ntBASIC20.13■□□□□ 0.81
Cux2P70298 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Cux2P70298 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cux2P70298 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cux2P70298 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cux2P70298 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Cux2P70298 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Cux2P70298 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Cux2P70298 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cux2P70298 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC20.12■□□□□ 0.81
Cux2P70298 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cux2P70298 Gm14892-201ENSMUST00000117636 267 ntBASIC20.12■□□□□ 0.81
Cux2P70298 Gm13351-201ENSMUST00000118087 414 ntBASIC20.12■□□□□ 0.81
Cux2P70298 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC20.12■□□□□ 0.81
Cux2P70298 Gm4811-201ENSMUST00000220879 1220 ntBASIC20.12■□□□□ 0.81
Cux2P70298 AC122346.3-201ENSMUST00000223983 306 ntBASIC20.12■□□□□ 0.81
Cux2P70298 AC093022.5-201ENSMUST00000226841 1079 ntBASIC20.12■□□□□ 0.81
Cux2P70298 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cux2P70298 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Cux2P70298 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cux2P70298 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cux2P70298 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cux2P70298 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cux2P70298 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cux2P70298 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Cux2P70298 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cux2P70298 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cux2P70298 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
Cux2P70298 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cux2P70298 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cux2P70298 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cux2P70298 Gm37736-201ENSMUST00000193564 2802 ntBASIC20.11■□□□□ 0.81
Cux2P70298 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC20.11■□□□□ 0.81
Cux2P70298 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Cux2P70298 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cux2P70298 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Cux2P70298 Gm7719-201ENSMUST00000182374 975 ntBASIC20.11■□□□□ 0.81
Cux2P70298 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Cux2P70298 Gm5870-201ENSMUST00000196461 282 ntBASIC20.11■□□□□ 0.81
Cux2P70298 Gm45113-201ENSMUST00000207518 165 ntBASIC20.11■□□□□ 0.81
Cux2P70298 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cux2P70298 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cux2P70298 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cux2P70298 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cux2P70298 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cux2P70298 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cux2P70298 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cux2P70298 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cux2P70298 Gm6655-201ENSMUST00000201932 1309 ntBASIC20.11■□□□□ 0.81
Cux2P70298 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cux2P70298 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC20.11■□□□□ 0.81
Cux2P70298 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cux2P70298 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cux2P70298 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cux2P70298 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cux2P70298 AC126257.1-201ENSMUST00000213195 1536 ntBASIC20.11■□□□□ 0.81
Cux2P70298 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cux2P70298 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cux2P70298 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cux2P70298 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cux2P70298 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cux2P70298 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cux2P70298 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC20.1■□□□□ 0.81
Cux2P70298 Gm8451-201ENSMUST00000170338 447 ntBASIC20.1■□□□□ 0.81
Cux2P70298 Gm7536-201ENSMUST00000077389 444 ntBASIC20.1■□□□□ 0.81
Cux2P70298 Gm5453-201ENSMUST00000080866 447 ntBASIC20.1■□□□□ 0.81
Cux2P70298 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux2P70298 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux2P70298 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux2P70298 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux2P70298 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cux2P70298 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux2P70298 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux2P70298 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC20.1■□□□□ 0.81
Cux2P70298 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux2P70298 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux2P70298 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux2P70298 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC20.1■□□□□ 0.81
Cux2P70298 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux2P70298 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cux2P70298 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC20.1■□□□□ 0.81
Cux2P70298 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux2P70298 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cux2P70298 Gm23912-201ENSMUST00000104687 87 ntBASIC20.1■□□□□ 0.81
Cux2P70298 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Cux2P70298 AC238811.4-201ENSMUST00000178019 1246 ntBASIC20.1■□□□□ 0.81
Cux2P70298 AC238940.3-201ENSMUST00000178830 1246 ntBASIC20.1■□□□□ 0.81
Cux2P70298 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cux2P70298 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC20.1■□□□□ 0.81
Cux2P70298 Gm18776-201ENSMUST00000188833 654 ntBASIC20.1■□□□□ 0.81
Cux2P70298 Gm9884-201ENSMUST00000194343 1222 ntBASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms