Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.44□□□□□ -0.74
Lsm5P62322 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Lsm5P62322 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.44□□□□□ -0.74
Lsm5P62322 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Lsm5P62322 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.44□□□□□ -0.74
Lsm5P62322 Cd63-ps-201ENSMUST00000145417 875 ntBASIC10.44□□□□□ -0.74
Lsm5P62322 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Lsm5P62322 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC10.44□□□□□ -0.74
Lsm5P62322 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.44□□□□□ -0.74
Lsm5P62322 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
Lsm5P62322 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Lsm5P62322 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.44□□□□□ -0.74
Lsm5P62322 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.44□□□□□ -0.74
Lsm5P62322 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm5P62322 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Lsm5P62322 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Lsm5P62322 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.43□□□□□ -0.74
Lsm5P62322 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Lsm5P62322 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.43□□□□□ -0.74
Lsm5P62322 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Lsm5P62322 Gm13813-201ENSMUST00000120998 787 ntBASIC10.43□□□□□ -0.74
Lsm5P62322 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Gm25144-201ENSMUST00000179561 110 ntBASIC10.43□□□□□ -0.74
Lsm5P62322 Gm25352-201ENSMUST00000179815 110 ntBASIC10.43□□□□□ -0.74
Lsm5P62322 Gm44344-201ENSMUST00000200287 129 ntBASIC10.43□□□□□ -0.74
Lsm5P62322 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC10.43□□□□□ -0.74
Lsm5P62322 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.43□□□□□ -0.74
Lsm5P62322 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Lsm5P62322 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.43□□□□□ -0.74
Lsm5P62322 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.43□□□□□ -0.74
Lsm5P62322 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.43□□□□□ -0.74
Lsm5P62322 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Lsm5P62322 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Lsm5P62322 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm5P62322 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm5P62322 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.42□□□□□ -0.74
Lsm5P62322 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm5P62322 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm5P62322 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm5P62322 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Lsm5P62322 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm5P62322 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm5P62322 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Lsm5P62322 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Lsm5P62322 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Lsm5P62322 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lsm5P62322 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms