Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.1□□□□□ -0.63
Sec61a1P61620 Gm13612-201ENSMUST00000119276 390 ntBASIC11.1□□□□□ -0.63
Sec61a1P61620 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.1□□□□□ -0.63
Sec61a1P61620 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.1□□□□□ -0.63
Sec61a1P61620 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.1□□□□□ -0.63
Sec61a1P61620 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.1□□□□□ -0.63
Sec61a1P61620 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Sec61a1P61620 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.1□□□□□ -0.63
Sec61a1P61620 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.1□□□□□ -0.63
Sec61a1P61620 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.1□□□□□ -0.63
Sec61a1P61620 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.1□□□□□ -0.63
Sec61a1P61620 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.1□□□□□ -0.63
Sec61a1P61620 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sec61a1P61620 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.09□□□□□ -0.63
Sec61a1P61620 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Sec61a1P61620 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sec61a1P61620 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sec61a1P61620 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sec61a1P61620 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sec61a1P61620 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.09□□□□□ -0.63
Sec61a1P61620 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Gm11814-201ENSMUST00000119515 929 ntBASIC11.09□□□□□ -0.63
Sec61a1P61620 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Gm6152-201ENSMUST00000151704 340 ntBASIC11.09□□□□□ -0.63
Sec61a1P61620 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.09□□□□□ -0.63
Sec61a1P61620 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.09□□□□□ -0.63
Sec61a1P61620 Gm19931-201ENSMUST00000198920 368 ntBASIC11.09□□□□□ -0.63
Sec61a1P61620 Gm18062-201ENSMUST00000208020 547 ntBASIC11.09□□□□□ -0.63
Sec61a1P61620 Gm18055-201ENSMUST00000208254 547 ntBASIC11.09□□□□□ -0.63
Sec61a1P61620 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Sec61a1P61620 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.09□□□□□ -0.63
Sec61a1P61620 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Sec61a1P61620 Gm8598-201ENSMUST00000221184 836 ntBASIC11.09□□□□□ -0.63
Sec61a1P61620 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.09□□□□□ -0.63
Sec61a1P61620 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Gm6091-201ENSMUST00000098307 165 ntBASIC11.09□□□□□ -0.63
Sec61a1P61620 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sec61a1P61620 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sec61a1P61620 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Sec61a1P61620 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sec61a1P61620 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Sec61a1P61620 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.09□□□□□ -0.63
Sec61a1P61620 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.09□□□□□ -0.63
Sec61a1P61620 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sec61a1P61620 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.63
Sec61a1P61620 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a1P61620 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sec61a1P61620 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a1P61620 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a1P61620 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sec61a1P61620 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sec61a1P61620 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a1P61620 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a1P61620 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a1P61620 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a1P61620 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a1P61620 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Sec61a1P61620 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a1P61620 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a1P61620 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a1P61620 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sec61a1P61620 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.08□□□□□ -0.64
Sec61a1P61620 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Sec61a1P61620 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a1P61620 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sec61a1P61620 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms