Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubgcp3P58854 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubgcp3P58854 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.83□□□□□ -0.36
Tubgcp3P58854 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubgcp3P58854 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubgcp3P58854 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tubgcp3P58854 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubgcp3P58854 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubgcp3P58854 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubgcp3P58854 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.82□□□□□ -0.36
Tubgcp3P58854 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.82□□□□□ -0.36
Tubgcp3P58854 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.82□□□□□ -0.36
Tubgcp3P58854 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.82□□□□□ -0.36
Tubgcp3P58854 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.82□□□□□ -0.36
Tubgcp3P58854 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.82□□□□□ -0.36
Tubgcp3P58854 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.82□□□□□ -0.36
Tubgcp3P58854 Gm6266-201ENSMUST00000203844 806 ntBASIC12.82□□□□□ -0.36
Tubgcp3P58854 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.82□□□□□ -0.36
Tubgcp3P58854 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.82□□□□□ -0.36
Tubgcp3P58854 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubgcp3P58854 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.81□□□□□ -0.36
Tubgcp3P58854 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.81□□□□□ -0.36
Tubgcp3P58854 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tubgcp3P58854 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tubgcp3P58854 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.81□□□□□ -0.36
Tubgcp3P58854 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.81□□□□□ -0.36
Tubgcp3P58854 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.81□□□□□ -0.36
Tubgcp3P58854 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.81□□□□□ -0.36
Tubgcp3P58854 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Gm24526-201ENSMUST00000082921 158 ntBASIC12.81□□□□□ -0.36
Tubgcp3P58854 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.81□□□□□ -0.36
Tubgcp3P58854 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tubgcp3P58854 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tubgcp3P58854 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.8□□□□□ -0.36
Tubgcp3P58854 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubgcp3P58854 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubgcp3P58854 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tubgcp3P58854 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubgcp3P58854 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubgcp3P58854 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Tubgcp3P58854 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubgcp3P58854 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubgcp3P58854 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubgcp3P58854 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tubgcp3P58854 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubgcp3P58854 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubgcp3P58854 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms