Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrp1P56183 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.16□□□□□ -0.14
Rrp1P56183 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rrp1P56183 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.15□□□□□ -0.14
Rrp1P56183 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.15□□□□□ -0.14
Rrp1P56183 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.15□□□□□ -0.14
Rrp1P56183 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC14.15□□□□□ -0.14
Rrp1P56183 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.15□□□□□ -0.14
Rrp1P56183 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.15□□□□□ -0.14
Rrp1P56183 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.15□□□□□ -0.14
Rrp1P56183 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.15□□□□□ -0.14
Rrp1P56183 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.15□□□□□ -0.14
Rrp1P56183 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Rrp1P56183 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.15□□□□□ -0.14
Rrp1P56183 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rrp1P56183 Rubie-203ENSMUST00000227803 2430 ntBASIC14.15□□□□□ -0.14
Rrp1P56183 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rrp1P56183 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp1P56183 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rrp1P56183 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rrp1P56183 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rrp1P56183 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp1P56183 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Rrp1P56183 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rrp1P56183 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp1P56183 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp1P56183 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp1P56183 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rrp1P56183 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp1P56183 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp1P56183 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp1P56183 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp1P56183 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.14□□□□□ -0.15
Rrp1P56183 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp1P56183 Gm11803-201ENSMUST00000119966 444 ntBASIC14.14□□□□□ -0.15
Rrp1P56183 Gm2231-201ENSMUST00000125661 612 ntBASIC14.14□□□□□ -0.15
Rrp1P56183 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp1P56183 Gm26185-201ENSMUST00000157692 266 ntBASIC14.14□□□□□ -0.15
Rrp1P56183 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Rrp1P56183 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.14□□□□□ -0.15
Rrp1P56183 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.14□□□□□ -0.15
Rrp1P56183 Gm27331-201ENSMUST00000183705 60 ntBASIC14.14□□□□□ -0.15
Rrp1P56183 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.14□□□□□ -0.15
Rrp1P56183 Gm28911-201ENSMUST00000188837 117 ntBASIC14.14□□□□□ -0.15
Rrp1P56183 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.14□□□□□ -0.15
Rrp1P56183 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.14□□□□□ -0.15
Rrp1P56183 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.14□□□□□ -0.15
Rrp1P56183 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.14□□□□□ -0.15
Rrp1P56183 Gm37497-201ENSMUST00000195830 798 ntBASIC14.14□□□□□ -0.15
Rrp1P56183 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Rrp1P56183 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp1P56183 Gm32025-201ENSMUST00000217960 307 ntBASIC14.14□□□□□ -0.15
Rrp1P56183 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp1P56183 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp1P56183 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rrp1P56183 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rrp1P56183 Arhgef3-204ENSMUST00000225949 3198 ntBASIC14.14□□□□□ -0.15
Rrp1P56183 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp1P56183 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp1P56183 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rrp1P56183 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.14□□□□□ -0.15
Rrp1P56183 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp1P56183 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp1P56183 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rrp1P56183 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp1P56183 Gm43174-201ENSMUST00000195914 2445 ntBASIC14.13□□□□□ -0.15
Rrp1P56183 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Rrp1P56183 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp1P56183 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp1P56183 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp1P56183 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp1P56183 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms