Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SftpbP50405 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SftpbP50405 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SftpbP50405 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.84□□□□□ -0.35
SftpbP50405 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SftpbP50405 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SftpbP50405 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.84□□□□□ -0.35
SftpbP50405 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SftpbP50405 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.84□□□□□ -0.35
SftpbP50405 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SftpbP50405 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SftpbP50405 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SftpbP50405 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.84□□□□□ -0.35
SftpbP50405 Gm8213-201ENSMUST00000118191 441 ntBASIC12.84□□□□□ -0.35
SftpbP50405 Gm11803-201ENSMUST00000119966 444 ntBASIC12.84□□□□□ -0.35
SftpbP50405 Gm11918-201ENSMUST00000121660 179 ntBASIC12.84□□□□□ -0.35
SftpbP50405 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.84□□□□□ -0.35
SftpbP50405 Gm23363-201ENSMUST00000175024 79 ntBASIC12.84□□□□□ -0.35
SftpbP50405 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.84□□□□□ -0.35
SftpbP50405 Gm8515-201ENSMUST00000194852 576 ntBASIC12.84□□□□□ -0.35
SftpbP50405 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.84□□□□□ -0.35
SftpbP50405 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
SftpbP50405 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SftpbP50405 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.84□□□□□ -0.35
SftpbP50405 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.84□□□□□ -0.35
SftpbP50405 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.84□□□□□ -0.35
SftpbP50405 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SftpbP50405 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SftpbP50405 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.84□□□□□ -0.35
SftpbP50405 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SftpbP50405 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SftpbP50405 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SftpbP50405 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SftpbP50405 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SftpbP50405 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SftpbP50405 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SftpbP50405 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SftpbP50405 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SftpbP50405 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.84□□□□□ -0.35
SftpbP50405 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.84□□□□□ -0.35
SftpbP50405 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SftpbP50405 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.84□□□□□ -0.35
SftpbP50405 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SftpbP50405 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SftpbP50405 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
SftpbP50405 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
SftpbP50405 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
SftpbP50405 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SftpbP50405 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SftpbP50405 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SftpbP50405 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.83□□□□□ -0.36
SftpbP50405 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SftpbP50405 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.83□□□□□ -0.36
SftpbP50405 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.83□□□□□ -0.36
SftpbP50405 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.83□□□□□ -0.36
SftpbP50405 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.83□□□□□ -0.36
SftpbP50405 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SftpbP50405 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SftpbP50405 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SftpbP50405 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.83□□□□□ -0.36
SftpbP50405 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SftpbP50405 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SftpbP50405 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SftpbP50405 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SftpbP50405 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SftpbP50405 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SftpbP50405 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SftpbP50405 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SftpbP50405 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SftpbP50405 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SftpbP50405 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SftpbP50405 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.82□□□□□ -0.36
SftpbP50405 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SftpbP50405 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SftpbP50405 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms