Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.04□□□□□ -0.64
GdnfP48540 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.04□□□□□ -0.64
GdnfP48540 Gm27701-201ENSMUST00000184498 110 ntBASIC11.04□□□□□ -0.64
GdnfP48540 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.04□□□□□ -0.64
GdnfP48540 Gm44397-201ENSMUST00000195950 113 ntBASIC11.04□□□□□ -0.64
GdnfP48540 Gm9794-201ENSMUST00000202370 423 ntBASIC11.04□□□□□ -0.64
GdnfP48540 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.04□□□□□ -0.64
GdnfP48540 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.04□□□□□ -0.64
GdnfP48540 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.04□□□□□ -0.64
GdnfP48540 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.03□□□□□ -0.64
GdnfP48540 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.03□□□□□ -0.64
GdnfP48540 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
GdnfP48540 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.03□□□□□ -0.64
GdnfP48540 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Gm15371-201ENSMUST00000117057 784 ntBASIC11.03□□□□□ -0.64
GdnfP48540 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.03□□□□□ -0.64
GdnfP48540 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.03□□□□□ -0.64
GdnfP48540 Gm12490-201ENSMUST00000120255 560 ntBASIC11.03□□□□□ -0.64
GdnfP48540 Gm11918-201ENSMUST00000121660 179 ntBASIC11.03□□□□□ -0.64
GdnfP48540 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
GdnfP48540 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.03□□□□□ -0.64
GdnfP48540 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.03□□□□□ -0.64
GdnfP48540 Gm7430-201ENSMUST00000193824 1144 ntBASIC11.03□□□□□ -0.64
GdnfP48540 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Gm8463-201ENSMUST00000208573 613 ntBASIC11.03□□□□□ -0.64
GdnfP48540 Gm45878-201ENSMUST00000211839 241 ntBASIC11.03□□□□□ -0.64
GdnfP48540 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.03□□□□□ -0.64
GdnfP48540 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.03□□□□□ -0.64
GdnfP48540 AC102523.2-201ENSMUST00000227813 983 ntBASIC11.03□□□□□ -0.64
GdnfP48540 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
GdnfP48540 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.03□□□□□ -0.64
GdnfP48540 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.03□□□□□ -0.64
GdnfP48540 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
GdnfP48540 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
GdnfP48540 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
GdnfP48540 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
GdnfP48540 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
GdnfP48540 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.02□□□□□ -0.64
GdnfP48540 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.02□□□□□ -0.64
GdnfP48540 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.02□□□□□ -0.64
GdnfP48540 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
GdnfP48540 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
GdnfP48540 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
GdnfP48540 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
GdnfP48540 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
GdnfP48540 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
GdnfP48540 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms