Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Vps4bP46467 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.76□□□□□ -0.37
Vps4bP46467 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.76□□□□□ -0.37
Vps4bP46467 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vps4bP46467 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.76□□□□□ -0.37
Vps4bP46467 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Vps4bP46467 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vps4bP46467 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.76□□□□□ -0.37
Vps4bP46467 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vps4bP46467 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vps4bP46467 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps4bP46467 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4bP46467 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.75□□□□□ -0.37
Vps4bP46467 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4bP46467 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Vps4bP46467 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Vps4bP46467 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Vps4bP46467 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps4bP46467 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4bP46467 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps4bP46467 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.75□□□□□ -0.37
Vps4bP46467 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps4bP46467 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4bP46467 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Vps4bP46467 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4bP46467 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.75□□□□□ -0.37
Vps4bP46467 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4bP46467 Gm17420-201ENSMUST00000164753 153 ntBASIC12.75□□□□□ -0.37
Vps4bP46467 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4bP46467 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
Vps4bP46467 Gm27486-201ENSMUST00000184923 80 ntBASIC12.75□□□□□ -0.37
Vps4bP46467 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.75□□□□□ -0.37
Vps4bP46467 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.75□□□□□ -0.37
Vps4bP46467 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.75□□□□□ -0.37
Vps4bP46467 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.75□□□□□ -0.37
Vps4bP46467 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4bP46467 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4bP46467 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps4bP46467 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4bP46467 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.75□□□□□ -0.37
Vps4bP46467 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4bP46467 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.75□□□□□ -0.37
Vps4bP46467 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4bP46467 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4bP46467 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4bP46467 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4bP46467 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Vps4bP46467 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Vps4bP46467 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4bP46467 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Vps4bP46467 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.75□□□□□ -0.37
Vps4bP46467 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vps4bP46467 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.74□□□□□ -0.37
Vps4bP46467 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4bP46467 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Vps4bP46467 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4bP46467 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Vps4bP46467 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.74□□□□□ -0.37
Vps4bP46467 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4bP46467 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.74□□□□□ -0.37
Vps4bP46467 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.74□□□□□ -0.37
Vps4bP46467 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Vps4bP46467 Gm15703-201ENSMUST00000120250 880 ntBASIC12.74□□□□□ -0.37
Vps4bP46467 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.74□□□□□ -0.37
Vps4bP46467 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4bP46467 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.74□□□□□ -0.37
Vps4bP46467 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4bP46467 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4bP46467 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4bP46467 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4bP46467 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.74□□□□□ -0.37
Vps4bP46467 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Vps4bP46467 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.74□□□□□ -0.37
Vps4bP46467 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4bP46467 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Vps4bP46467 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4bP46467 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.74□□□□□ -0.37
Vps4bP46467 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4bP46467 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4bP46467 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Vps4bP46467 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Vps4bP46467 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps4bP46467 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps4bP46467 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms