Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-6P43688 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Nkx2-6P43688 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-6P43688 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Nkx2-6P43688 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.9□□□□□ -0.5
Nkx2-6P43688 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-6P43688 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.9□□□□□ -0.5
Nkx2-6P43688 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-6P43688 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-6P43688 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Gm7857-201ENSMUST00000117957 358 ntBASIC11.9□□□□□ -0.5
Nkx2-6P43688 Gm13813-201ENSMUST00000120998 787 ntBASIC11.9□□□□□ -0.5
Nkx2-6P43688 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.9□□□□□ -0.5
Nkx2-6P43688 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.9□□□□□ -0.5
Nkx2-6P43688 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Nsd1-205ENSMUST00000224693 852 ntBASIC11.9□□□□□ -0.5
Nkx2-6P43688 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-6P43688 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-6P43688 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-6P43688 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.9□□□□□ -0.51
Nkx2-6P43688 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nkx2-6P43688 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.9□□□□□ -0.51
Nkx2-6P43688 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Nkx2-6P43688 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.89□□□□□ -0.51
Nkx2-6P43688 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.89□□□□□ -0.51
Nkx2-6P43688 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Gm14028-201ENSMUST00000117434 479 ntBASIC11.89□□□□□ -0.51
Nkx2-6P43688 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.89□□□□□ -0.51
Nkx2-6P43688 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.89□□□□□ -0.51
Nkx2-6P43688 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.89□□□□□ -0.51
Nkx2-6P43688 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.89□□□□□ -0.51
Nkx2-6P43688 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.89□□□□□ -0.51
Nkx2-6P43688 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.89□□□□□ -0.51
Nkx2-6P43688 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.89□□□□□ -0.51
Nkx2-6P43688 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-6P43688 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.89□□□□□ -0.51
Nkx2-6P43688 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkx2-6P43688 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-6P43688 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms