Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HttP42859 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HttP42859 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.95□□□□□ -0.34
HttP42859 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
HttP42859 Gm9673-201ENSMUST00000119287 781 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC12.95□□□□□ -0.34
HttP42859 Gm23400-201ENSMUST00000174994 102 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm26463-201ENSMUST00000175065 101 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm24332-201ENSMUST00000175102 102 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm25959-201ENSMUST00000175112 102 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm22475-201ENSMUST00000175169 102 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm22903-201ENSMUST00000175193 102 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm25070-201ENSMUST00000175237 102 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm24159-201ENSMUST00000175264 102 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm25299-201ENSMUST00000175283 102 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm23798-201ENSMUST00000175560 102 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm23802-201ENSMUST00000175565 102 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm25708-201ENSMUST00000177687 102 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm24370-201ENSMUST00000178007 102 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm23049-201ENSMUST00000178068 102 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm28019-201ENSMUST00000178138 101 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm25571-201ENSMUST00000178322 102 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm25355-201ENSMUST00000178456 101 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm24975-201ENSMUST00000178492 101 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm23189-201ENSMUST00000178954 102 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm25100-201ENSMUST00000179750 101 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm23064-201ENSMUST00000179866 101 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC12.95□□□□□ -0.34
HttP42859 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
HttP42859 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HttP42859 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HttP42859 Gm8956-201ENSMUST00000203939 825 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC12.95□□□□□ -0.34
HttP42859 Gm4930-201ENSMUST00000219926 1087 ntBASIC12.95□□□□□ -0.34
HttP42859 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.95□□□□□ -0.34
HttP42859 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
HttP42859 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HttP42859 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HttP42859 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HttP42859 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
HttP42859 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HttP42859 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
HttP42859 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.95□□□□□ -0.34
HttP42859 Gm7150-201ENSMUST00000122032 981 ntBASIC12.95□□□□□ -0.34
HttP42859 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC12.95□□□□□ -0.34
HttP42859 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.95□□□□□ -0.34
HttP42859 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC12.95□□□□□ -0.34
HttP42859 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HttP42859 Gm43249-201ENSMUST00000200464 458 ntBASIC12.95□□□□□ -0.34
HttP42859 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HttP42859 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HttP42859 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HttP42859 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.94□□□□□ -0.34
HttP42859 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HttP42859 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HttP42859 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
HttP42859 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
HttP42859 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HttP42859 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HttP42859 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
HttP42859 Gm15707-201ENSMUST00000118804 996 ntBASIC12.94□□□□□ -0.34
HttP42859 Mir1905-201ENSMUST00000122779 82 ntBASIC12.94□□□□□ -0.34
HttP42859 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC12.94□□□□□ -0.34
HttP42859 Gm8459-201ENSMUST00000162504 760 ntBASIC12.94□□□□□ -0.34
HttP42859 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.94□□□□□ -0.34
HttP42859 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC12.94□□□□□ -0.34
HttP42859 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC12.94□□□□□ -0.34
HttP42859 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.94□□□□□ -0.34
HttP42859 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HttP42859 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HttP42859 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
HttP42859 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
HttP42859 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HttP42859 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.94□□□□□ -0.34
HttP42859 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
HttP42859 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
HttP42859 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HttP42859 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HttP42859 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
HttP42859 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HttP42859 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HttP42859 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HttP42859 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HttP42859 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HttP42859 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC12.94□□□□□ -0.34
HttP42859 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.94□□□□□ -0.34
HttP42859 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HttP42859 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
HttP42859 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
HttP42859 Olfr584-201ENSMUST00000098210 964 ntBASIC12.94□□□□□ -0.34
HttP42859 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HttP42859 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HttP42859 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HttP42859 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HttP42859 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HttP42859 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
HttP42859 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms