Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Gm7653-201ENSMUST00000214567 508 ntBASIC12.66□□□□□ -0.38
Fen1P39749 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Fen1P39749 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.66□□□□□ -0.38
Fen1P39749 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fen1P39749 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.66□□□□□ -0.38
Fen1P39749 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Fen1P39749 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fen1P39749 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Fen1P39749 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fen1P39749 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fen1P39749 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fen1P39749 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fen1P39749 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fen1P39749 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Fen1P39749 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fen1P39749 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fen1P39749 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fen1P39749 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fen1P39749 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fen1P39749 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fen1P39749 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Fen1P39749 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.65□□□□□ -0.38
Fen1P39749 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.65□□□□□ -0.38
Fen1P39749 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fen1P39749 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.65□□□□□ -0.38
Fen1P39749 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.65□□□□□ -0.38
Fen1P39749 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fen1P39749 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.65□□□□□ -0.38
Fen1P39749 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Fen1P39749 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fen1P39749 Gm28631-201ENSMUST00000190740 334 ntBASIC12.65□□□□□ -0.38
Fen1P39749 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.65□□□□□ -0.38
Fen1P39749 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.65□□□□□ -0.38
Fen1P39749 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.65□□□□□ -0.38
Fen1P39749 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.65□□□□□ -0.38
Fen1P39749 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fen1P39749 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Fen1P39749 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fen1P39749 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Fen1P39749 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fen1P39749 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Fen1P39749 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fen1P39749 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fen1P39749 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Fen1P39749 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Fen1P39749 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Fen1P39749 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fen1P39749 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fen1P39749 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fen1P39749 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fen1P39749 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Fen1P39749 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.64□□□□□ -0.39
Fen1P39749 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Fen1P39749 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fen1P39749 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.64□□□□□ -0.39
Fen1P39749 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Fen1P39749 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.64□□□□□ -0.39
Fen1P39749 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.64□□□□□ -0.39
Fen1P39749 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.64□□□□□ -0.39
Fen1P39749 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.64□□□□□ -0.39
Fen1P39749 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.64□□□□□ -0.39
Fen1P39749 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fen1P39749 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fen1P39749 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fen1P39749 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fen1P39749 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fen1P39749 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fen1P39749 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Fen1P39749 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Fen1P39749 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fen1P39749 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fen1P39749 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fen1P39749 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Fen1P39749 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Fen1P39749 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Fen1P39749 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Fen1P39749 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fen1P39749 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fen1P39749 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Fen1P39749 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.64□□□□□ -0.39
Fen1P39749 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Fen1P39749 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fen1P39749 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Fen1P39749 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fen1P39749 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fen1P39749 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fen1P39749 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Fen1P39749 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fen1P39749 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fen1P39749 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fen1P39749 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fen1P39749 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Fen1P39749 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms