Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VimP20152 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
VimP20152 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
VimP20152 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VimP20152 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VimP20152 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VimP20152 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VimP20152 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
VimP20152 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
VimP20152 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VimP20152 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
VimP20152 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VimP20152 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VimP20152 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VimP20152 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VimP20152 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
VimP20152 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.72□□□□□ -0.37
VimP20152 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.72□□□□□ -0.37
VimP20152 Gm13365-201ENSMUST00000121188 973 ntBASIC12.72□□□□□ -0.37
VimP20152 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.72□□□□□ -0.37
VimP20152 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.72□□□□□ -0.37
VimP20152 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VimP20152 Gm42599-201ENSMUST00000201308 469 ntBASIC12.72□□□□□ -0.37
VimP20152 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VimP20152 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
VimP20152 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.72□□□□□ -0.37
VimP20152 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VimP20152 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
VimP20152 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VimP20152 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VimP20152 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VimP20152 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
VimP20152 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
VimP20152 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VimP20152 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VimP20152 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.72□□□□□ -0.37
VimP20152 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VimP20152 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VimP20152 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VimP20152 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VimP20152 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VimP20152 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VimP20152 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.71□□□□□ -0.37
VimP20152 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VimP20152 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VimP20152 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
VimP20152 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VimP20152 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VimP20152 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VimP20152 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
VimP20152 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
VimP20152 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VimP20152 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.71□□□□□ -0.37
VimP20152 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VimP20152 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.71□□□□□ -0.37
VimP20152 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.71□□□□□ -0.37
VimP20152 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.71□□□□□ -0.37
VimP20152 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.71□□□□□ -0.37
VimP20152 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VimP20152 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
VimP20152 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
VimP20152 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
VimP20152 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VimP20152 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VimP20152 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VimP20152 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
VimP20152 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.71□□□□□ -0.38
VimP20152 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VimP20152 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VimP20152 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
VimP20152 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
VimP20152 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.71□□□□□ -0.38
VimP20152 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
VimP20152 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VimP20152 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VimP20152 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
VimP20152 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VimP20152 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VimP20152 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
VimP20152 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
VimP20152 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
VimP20152 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.7□□□□□ -0.38
VimP20152 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.7□□□□□ -0.38
VimP20152 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
VimP20152 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VimP20152 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms