Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Msx1P13297 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Msx1P13297 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Msx1P13297 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.08□□□□□ -0.48
Msx1P13297 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.08□□□□□ -0.48
Msx1P13297 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.08□□□□□ -0.48
Msx1P13297 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Msx1P13297 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Msx1P13297 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Gm11893-201ENSMUST00000117829 491 ntBASIC12.08□□□□□ -0.48
Msx1P13297 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Gm10925-201ENSMUST00000189941 678 ntBASIC12.08□□□□□ -0.48
Msx1P13297 Gm38313-201ENSMUST00000191953 1266 ntBASIC12.08□□□□□ -0.48
Msx1P13297 Gm37684-201ENSMUST00000192779 355 ntBASIC12.08□□□□□ -0.48
Msx1P13297 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC12.08□□□□□ -0.48
Msx1P13297 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Msx1P13297 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Msx1P13297 Gm44845-201ENSMUST00000208773 335 ntBASIC12.08□□□□□ -0.48
Msx1P13297 AC153522.1-201ENSMUST00000220047 1090 ntBASIC12.08□□□□□ -0.48
Msx1P13297 Morn2-202ENSMUST00000227729 656 ntBASIC12.08□□□□□ -0.48
Msx1P13297 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.08□□□□□ -0.48
Msx1P13297 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Msx1P13297 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.08□□□□□ -0.48
Msx1P13297 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 AC163296.2-201ENSMUST00000220177 1315 ntBASIC12.08□□□□□ -0.48
Msx1P13297 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.08□□□□□ -0.48
Msx1P13297 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Msx1P13297 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Msx1P13297 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Msx1P13297 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC12.07□□□□□ -0.48
Msx1P13297 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.07□□□□□ -0.48
Msx1P13297 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.07□□□□□ -0.48
Msx1P13297 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Msx1P13297 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Msx1P13297 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.07□□□□□ -0.48
Msx1P13297 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC12.07□□□□□ -0.48
Msx1P13297 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.07□□□□□ -0.48
Msx1P13297 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Gm5781-201ENSMUST00000219792 443 ntBASIC12.07□□□□□ -0.48
Msx1P13297 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC12.07□□□□□ -0.48
Msx1P13297 AC158388.1-201ENSMUST00000225441 256 ntBASIC12.07□□□□□ -0.48
Msx1P13297 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.07□□□□□ -0.48
Msx1P13297 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Hprt-201ENSMUST00000026723 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Msx1P13297 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.07□□□□□ -0.48
Msx1P13297 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Msx1P13297 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms