Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxd3P09027 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxd3P09027 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxd3P09027 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Hoxd3P09027 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxd3P09027 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxd3P09027 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxd3P09027 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxd3P09027 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxd3P09027 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxd3P09027 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hoxd3P09027 Gm37324-201ENSMUST00000194500 4504 ntBASIC9.94□□□□□ -0.82
Hoxd3P09027 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Gm9025-201ENSMUST00000122415 1575 ntBASIC9.93□□□□□ -0.82
Hoxd3P09027 AC113060.1-201ENSMUST00000225689 1573 ntBASIC9.93□□□□□ -0.82
Hoxd3P09027 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC9.93□□□□□ -0.82
Hoxd3P09027 AC122314.1-201ENSMUST00000223056 2239 ntBASIC9.93□□□□□ -0.82
Hoxd3P09027 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC9.93□□□□□ -0.82
Hoxd3P09027 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Gm13342-201ENSMUST00000121055 207 ntBASIC9.93□□□□□ -0.82
Hoxd3P09027 Gm13786-201ENSMUST00000122371 333 ntBASIC9.93□□□□□ -0.82
Hoxd3P09027 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Gm25653-201ENSMUST00000158473 138 ntBASIC9.93□□□□□ -0.82
Hoxd3P09027 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC9.93□□□□□ -0.82
Hoxd3P09027 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Gm23363-201ENSMUST00000175024 79 ntBASIC9.93□□□□□ -0.82
Hoxd3P09027 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Gm28455-201ENSMUST00000189105 1290 ntBASIC9.93□□□□□ -0.82
Hoxd3P09027 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC9.93□□□□□ -0.82
Hoxd3P09027 AC166051.1-201ENSMUST00000214313 210 ntBASIC9.93□□□□□ -0.82
Hoxd3P09027 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC9.93□□□□□ -0.82
Hoxd3P09027 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Hoxd3P09027 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Hoxd3P09027 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC9.93□□□□□ -0.82
Hoxd3P09027 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Hoxd3P09027 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hoxd3P09027 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Hoxd3P09027 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Hoxd3P09027 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC9.92□□□□□ -0.82
Hoxd3P09027 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC9.92□□□□□ -0.82
Hoxd3P09027 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Hoxd3P09027 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms