Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.05□□□□□ -0.64
P04224 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.05□□□□□ -0.64
P04224 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.05□□□□□ -0.64
P04224 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.05□□□□□ -0.64
P04224 Gm12403-201ENSMUST00000121384 959 ntBASIC11.05□□□□□ -0.64
P04224 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
P04224 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
P04224 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.05□□□□□ -0.64
P04224 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.05□□□□□ -0.64
P04224 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.05□□□□□ -0.64
P04224 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.05□□□□□ -0.64
P04224 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.05□□□□□ -0.64
P04224 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.05□□□□□ -0.64
P04224 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.05□□□□□ -0.64
P04224 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.05□□□□□ -0.64
P04224 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
P04224 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
P04224 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
P04224 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
P04224 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04224 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.05□□□□□ -0.64
P04224 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
P04224 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
P04224 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.04□□□□□ -0.64
P04224 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.04□□□□□ -0.64
P04224 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Gm43575-201ENSMUST00000196420 516 ntBASIC11.04□□□□□ -0.64
P04224 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.04□□□□□ -0.64
P04224 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.04□□□□□ -0.64
P04224 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
P04224 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.04□□□□□ -0.64
P04224 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
P04224 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
P04224 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
P04224 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
P04224 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
P04224 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04224 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.03□□□□□ -0.64
P04224 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.03□□□□□ -0.64
P04224 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.03□□□□□ -0.64
P04224 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P04224 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms