Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.6□□□□□ -0.55
Cops4O88544 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.6□□□□□ -0.55
Cops4O88544 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.6□□□□□ -0.55
Cops4O88544 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Gm44855-201ENSMUST00000205725 362 ntBASIC11.6□□□□□ -0.55
Cops4O88544 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.6□□□□□ -0.55
Cops4O88544 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.6□□□□□ -0.55
Cops4O88544 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.6□□□□□ -0.55
Cops4O88544 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Cops4O88544 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cops4O88544 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cops4O88544 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Cog3-203ENSMUST00000227473 4197 ntBASIC11.6□□□□□ -0.55
Cops4O88544 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.59□□□□□ -0.55
Cops4O88544 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Cops4O88544 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Mir686-201ENSMUST00000102174 109 ntBASIC11.59□□□□□ -0.55
Cops4O88544 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.59□□□□□ -0.55
Cops4O88544 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Cops4O88544 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.59□□□□□ -0.55
Cops4O88544 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Gm38223-201ENSMUST00000194484 695 ntBASIC11.59□□□□□ -0.55
Cops4O88544 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.59□□□□□ -0.55
Cops4O88544 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.59□□□□□ -0.55
Cops4O88544 Gm6218-201ENSMUST00000219812 628 ntBASIC11.59□□□□□ -0.55
Cops4O88544 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.59□□□□□ -0.55
Cops4O88544 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cops4O88544 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Cops4O88544 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cops4O88544 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cops4O88544 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.59□□□□□ -0.55
Cops4O88544 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cops4O88544 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cops4O88544 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cops4O88544 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cops4O88544 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cops4O88544 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cops4O88544 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cops4O88544 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cops4O88544 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cops4O88544 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cops4O88544 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cops4O88544 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cops4O88544 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cops4O88544 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cops4O88544 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cops4O88544 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cops4O88544 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cops4O88544 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.58□□□□□ -0.56
Cops4O88544 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cops4O88544 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cops4O88544 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.58□□□□□ -0.56
Cops4O88544 Gm15371-201ENSMUST00000117057 784 ntBASIC11.58□□□□□ -0.56
Cops4O88544 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.58□□□□□ -0.56
Cops4O88544 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cops4O88544 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.58□□□□□ -0.56
Cops4O88544 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Cops4O88544 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cops4O88544 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms