Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.92□□□□□ -0.02
Smarce1O54941 Gm13369-201ENSMUST00000119442 987 ntBASIC14.92□□□□□ -0.02
Smarce1O54941 Gm11918-201ENSMUST00000121660 179 ntBASIC14.92□□□□□ -0.02
Smarce1O54941 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.92□□□□□ -0.02
Smarce1O54941 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.92□□□□□ -0.02
Smarce1O54941 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.92□□□□□ -0.02
Smarce1O54941 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 Auts2-212ENSMUST00000178555 309 ntBASIC14.92□□□□□ -0.02
Smarce1O54941 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.92□□□□□ -0.02
Smarce1O54941 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.92□□□□□ -0.02
Smarce1O54941 Gm17794-201ENSMUST00000220252 955 ntBASIC14.92□□□□□ -0.02
Smarce1O54941 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.92□□□□□ -0.02
Smarce1O54941 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Smarce1O54941 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.92□□□□□ -0.02
Smarce1O54941 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarce1O54941 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Smarce1O54941 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Smarce1O54941 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Smarce1O54941 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarce1O54941 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarce1O54941 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarce1O54941 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarce1O54941 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.91□□□□□ -0.02
Smarce1O54941 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarce1O54941 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarce1O54941 Mir1894-201ENSMUST00000122802 81 ntBASIC14.91□□□□□ -0.02
Smarce1O54941 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.91□□□□□ -0.02
Smarce1O54941 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarce1O54941 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarce1O54941 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.91□□□□□ -0.02
Smarce1O54941 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Smarce1O54941 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.91□□□□□ -0.02
Smarce1O54941 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarce1O54941 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.91□□□□□ -0.02
Smarce1O54941 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarce1O54941 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
Smarce1O54941 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarce1O54941 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarce1O54941 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarce1O54941 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.91□□□□□ -0.02
Smarce1O54941 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Smarce1O54941 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarce1O54941 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.91□□□□□ -0.02
Smarce1O54941 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarce1O54941 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarce1O54941 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarce1O54941 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarce1O54941 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarce1O54941 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarce1O54941 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarce1O54941 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Smarce1O54941 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Smarce1O54941 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarce1O54941 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarce1O54941 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarce1O54941 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.9□□□□□ -0.02
Smarce1O54941 Gm24231-201ENSMUST00000104315 133 ntBASIC14.9□□□□□ -0.02
Smarce1O54941 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Smarce1O54941 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarce1O54941 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarce1O54941 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarce1O54941 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.9□□□□□ -0.02
Smarce1O54941 Gm27331-201ENSMUST00000183705 60 ntBASIC14.9□□□□□ -0.02
Smarce1O54941 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Smarce1O54941 Gm45384-201ENSMUST00000210451 277 ntBASIC14.9□□□□□ -0.02
Smarce1O54941 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.9□□□□□ -0.02
Smarce1O54941 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarce1O54941 Gm10146-201ENSMUST00000072739 309 ntBASIC14.9□□□□□ -0.02
Smarce1O54941 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.9□□□□□ -0.02
Smarce1O54941 Gm24526-201ENSMUST00000082921 158 ntBASIC14.9□□□□□ -0.02
Smarce1O54941 Gm5356-201ENSMUST00000093326 615 ntBASIC14.9□□□□□ -0.02
Smarce1O54941 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Smarce1O54941 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.9□□□□□ -0.02
Smarce1O54941 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Smarce1O54941 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarce1O54941 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.9□□□□□ -0.02
Smarce1O54941 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarce1O54941 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarce1O54941 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarce1O54941 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarce1O54941 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarce1O54941 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarce1O54941 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarce1O54941 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Smarce1O54941 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC14.9□□□□□ -0.02
Smarce1O54941 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 254.6 ms