Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tcof1O08784 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tcof1O08784 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tcof1O08784 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tcof1O08784 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tcof1O08784 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tcof1O08784 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tcof1O08784 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tcof1O08784 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tcof1O08784 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tcof1O08784 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tcof1O08784 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tcof1O08784 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tcof1O08784 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tcof1O08784 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tcof1O08784 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tcof1O08784 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tcof1O08784 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tcof1O08784 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tcof1O08784 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tcof1O08784 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tcof1O08784 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tcof1O08784 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tcof1O08784 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tcof1O08784 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.69□□□□□ -0.06
Tcof1O08784 Gm14999-201ENSMUST00000121039 624 ntBASIC14.69□□□□□ -0.06
Tcof1O08784 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
Tcof1O08784 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tcof1O08784 Gm2383-201ENSMUST00000181461 807 ntBASIC14.69□□□□□ -0.06
Tcof1O08784 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.69□□□□□ -0.06
Tcof1O08784 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.69□□□□□ -0.06
Tcof1O08784 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tcof1O08784 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tcof1O08784 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.69□□□□□ -0.06
Tcof1O08784 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.69□□□□□ -0.06
Tcof1O08784 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Tcof1O08784 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.69□□□□□ -0.06
Tcof1O08784 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tcof1O08784 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Tcof1O08784 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tcof1O08784 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Tcof1O08784 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tcof1O08784 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Tcof1O08784 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tcof1O08784 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tcof1O08784 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tcof1O08784 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tcof1O08784 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tcof1O08784 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.69□□□□□ -0.06
Tcof1O08784 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.69□□□□□ -0.06
Tcof1O08784 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.69□□□□□ -0.06
Tcof1O08784 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tcof1O08784 Gm12314-201ENSMUST00000118104 538 ntBASIC14.68□□□□□ -0.06
Tcof1O08784 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tcof1O08784 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tcof1O08784 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tcof1O08784 Gm24845-201ENSMUST00000158034 109 ntBASIC14.68□□□□□ -0.06
Tcof1O08784 Mir7070-201ENSMUST00000183657 86 ntBASIC14.68□□□□□ -0.06
Tcof1O08784 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.68□□□□□ -0.06
Tcof1O08784 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.68□□□□□ -0.06
Tcof1O08784 Gm31256-201ENSMUST00000194705 506 ntBASIC14.68□□□□□ -0.06
Tcof1O08784 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.68□□□□□ -0.06
Tcof1O08784 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Tcof1O08784 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tcof1O08784 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tcof1O08784 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Tcof1O08784 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tcof1O08784 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tcof1O08784 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tcof1O08784 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tcof1O08784 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tcof1O08784 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tcof1O08784 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.68□□□□□ -0.06
Tcof1O08784 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tcof1O08784 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tcof1O08784 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.68□□□□□ -0.06
Tcof1O08784 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Tcof1O08784 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.68□□□□□ -0.06
Tcof1O08784 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tcof1O08784 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tcof1O08784 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tcof1O08784 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tcof1O08784 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tcof1O08784 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.68□□□□□ -0.06
Tcof1O08784 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.68□□□□□ -0.06
Tcof1O08784 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.68□□□□□ -0.06
Tcof1O08784 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tcof1O08784 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tcof1O08784 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tcof1O08784 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.67□□□□□ -0.06
Tcof1O08784 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Tcof1O08784 Rmrp-201ENSMUST00000157463 271 ntBASIC14.67□□□□□ -0.06
Tcof1O08784 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Tcof1O08784 Gm8712-201ENSMUST00000221090 701 ntBASIC14.67□□□□□ -0.06
Tcof1O08784 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.67□□□□□ -0.06
Tcof1O08784 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tcof1O08784 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Tcof1O08784 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tcof1O08784 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tcof1O08784 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms