Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NpcdF8VQB8 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC15.11■□□□□ 0.01
NpcdF8VQB8 H2-Q3-201ENSMUST00000172583 608 ntBASIC15.11■□□□□ 0.01
NpcdF8VQB8 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Prrxl1-205ENSMUST00000228878 723 ntBASIC15.11■□□□□ 0.01
NpcdF8VQB8 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Ginm1-202ENSMUST00000065124 300 ntBASIC15.11■□□□□ 0.01
NpcdF8VQB8 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
NpcdF8VQB8 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC15.11■□□□□ 0.01
NpcdF8VQB8 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Gm12291-201ENSMUST00000121627 311 ntBASIC15.1■□□□□ 0.01
NpcdF8VQB8 Gm22138-201ENSMUST00000158748 128 ntBASIC15.1■□□□□ 0.01
NpcdF8VQB8 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NpcdF8VQB8 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.1■□□□□ 0.01
NpcdF8VQB8 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NpcdF8VQB8 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NpcdF8VQB8 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.09■□□□□ 0.01
NpcdF8VQB8 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NpcdF8VQB8 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NpcdF8VQB8 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NpcdF8VQB8 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
NpcdF8VQB8 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.09■□□□□ 0.01
NpcdF8VQB8 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NpcdF8VQB8 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NpcdF8VQB8 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NpcdF8VQB8 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NpcdF8VQB8 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NpcdF8VQB8 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NpcdF8VQB8 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NpcdF8VQB8 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NpcdF8VQB8 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
NpcdF8VQB8 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NpcdF8VQB8 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NpcdF8VQB8 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NpcdF8VQB8 Gm11892-201ENSMUST00000117711 1202 ntBASIC15.09■□□□□ 0.01
NpcdF8VQB8 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC15.09■□□□□ 0.01
NpcdF8VQB8 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC15.09■□□□□ 0.01
NpcdF8VQB8 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15.09■□□□□ 0.01
NpcdF8VQB8 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NpcdF8VQB8 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC15.09■□□□□ 0.01
NpcdF8VQB8 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NpcdF8VQB8 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NpcdF8VQB8 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC15.09■□□□□ 0.01
NpcdF8VQB8 Gm6905-201ENSMUST00000205729 511 ntBASIC15.09■□□□□ 0.01
NpcdF8VQB8 Gm270-201ENSMUST00000223010 976 ntBASIC15.09■□□□□ 0.01
NpcdF8VQB8 AC174797.2-202ENSMUST00000225729 568 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms