Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Gm11478-201ENSMUST00000117851 599 ntBASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Gm8213-201ENSMUST00000118191 441 ntBASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Gm44069-201ENSMUST00000204898 506 ntBASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Gm8598-201ENSMUST00000221184 836 ntBASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Gm10156-201ENSMUST00000122364 462 ntBASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.62□□□□□ -0.39
Gm28043E0CXC2 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Gm10012-201ENSMUST00000078252 192 ntBASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.62□□□□□ -0.39
Gm28043E0CXC2 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28043E0CXC2 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Gm16202-201ENSMUST00000117532 544 ntBASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Gm11814-201ENSMUST00000119515 929 ntBASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Gm11424-201ENSMUST00000121929 829 ntBASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Gm11978-201ENSMUST00000122315 466 ntBASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Proscos-202ENSMUST00000178990 666 ntBASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Gm19931-201ENSMUST00000198920 368 ntBASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28043E0CXC2 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms