Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Chd3B1AR17 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 Gm12058-201ENSMUST00000118614 437 ntBASIC12.3□□□□□ -0.44
Chd3B1AR17 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.3□□□□□ -0.44
Chd3B1AR17 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Chd3B1AR17 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Chd3B1AR17 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Chd3B1AR17 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Chd3B1AR17 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.3□□□□□ -0.44
Chd3B1AR17 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.3□□□□□ -0.44
Chd3B1AR17 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Chd3B1AR17 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.3□□□□□ -0.44
Chd3B1AR17 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.3□□□□□ -0.44
Chd3B1AR17 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.3□□□□□ -0.44
Chd3B1AR17 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 Gm2260-201ENSMUST00000184965 657 ntBASIC12.3□□□□□ -0.44
Chd3B1AR17 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.3□□□□□ -0.44
Chd3B1AR17 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.3□□□□□ -0.44
Chd3B1AR17 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd3B1AR17 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chd3B1AR17 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.29□□□□□ -0.44
Chd3B1AR17 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd3B1AR17 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chd3B1AR17 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chd3B1AR17 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd3B1AR17 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd3B1AR17 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd3B1AR17 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Chd3B1AR17 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd3B1AR17 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Chd3B1AR17 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chd3B1AR17 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chd3B1AR17 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chd3B1AR17 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.29□□□□□ -0.44
Chd3B1AR17 Gm23200-201ENSMUST00000104379 132 ntBASIC12.29□□□□□ -0.44
Chd3B1AR17 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chd3B1AR17 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.29□□□□□ -0.44
Chd3B1AR17 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Chd3B1AR17 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd3B1AR17 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
Chd3B1AR17 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Chd3B1AR17 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd3B1AR17 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd3B1AR17 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chd3B1AR17 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.29□□□□□ -0.44
Chd3B1AR17 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd3B1AR17 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd3B1AR17 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd3B1AR17 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd3B1AR17 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chd3B1AR17 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd3B1AR17 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd3B1AR17 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chd3B1AR17 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd3B1AR17 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chd3B1AR17 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd3B1AR17 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.28□□□□□ -0.44
Chd3B1AR17 Gm12380-201ENSMUST00000119012 544 ntBASIC12.28□□□□□ -0.44
Chd3B1AR17 Gm13461-201ENSMUST00000120980 662 ntBASIC12.28□□□□□ -0.44
Chd3B1AR17 Gm14277-201ENSMUST00000121195 360 ntBASIC12.28□□□□□ -0.44
Chd3B1AR17 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.28□□□□□ -0.44
Chd3B1AR17 Gm8913-201ENSMUST00000209491 641 ntBASIC12.28□□□□□ -0.44
Chd3B1AR17 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.28□□□□□ -0.44
Chd3B1AR17 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.28□□□□□ -0.44
Chd3B1AR17 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.28□□□□□ -0.44
Chd3B1AR17 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.28□□□□□ -0.44
Chd3B1AR17 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Chd3B1AR17 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd3B1AR17 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd3B1AR17 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.28□□□□□ -0.44
Chd3B1AR17 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd3B1AR17 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chd3B1AR17 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Chd3B1AR17 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chd3B1AR17 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.28□□□□□ -0.44
Chd3B1AR17 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chd3B1AR17 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Chd3B1AR17 Rmrp-201ENSMUST00000157463 271 ntBASIC12.28□□□□□ -0.44
Chd3B1AR17 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms