Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gm6211-201ENSMUST00000147973 4275 ntBASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm44942-201ENSMUST00000096093 2072 ntBASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm42498-201ENSMUST00000199981 1372 ntBASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm12091-201ENSMUST00000146791 830 ntBASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm26464-201ENSMUST00000157094 305 ntBASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm42550-201ENSMUST00000201553 960 ntBASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 AC156560.2-201ENSMUST00000221232 264 ntBASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 AC154239.3-201ENSMUST00000226933 674 ntBASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav6n-6A0A075B6B2 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav6n-6A0A075B6B2 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav6n-6A0A075B6B2 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav6n-6A0A075B6B2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav6n-6A0A075B6B2 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC9.4□□□□□ -0.91
Trav6n-6A0A075B6B2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav6n-6A0A075B6B2 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav6n-6A0A075B6B2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav6n-6A0A075B6B2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav6n-6A0A075B6B2 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav6n-6A0A075B6B2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Trav6n-6A0A075B6B2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Trav6n-6A0A075B6B2 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav6n-6A0A075B6B2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav6n-6A0A075B6B2 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm9115-201ENSMUST00000120192 1348 ntBASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms