Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Gm13813-201ENSMUST00000120998 787 ntBASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Gm15379-201ENSMUST00000121224 648 ntBASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Gm15376-201ENSMUST00000122258 783 ntBASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Mir1943-201ENSMUST00000158276 73 ntBASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Gm4271-201ENSMUST00000174444 973 ntBASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Gm8604-201ENSMUST00000183150 965 ntBASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Gm4870-201ENSMUST00000198525 1251 ntBASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Gm18645-202ENSMUST00000212222 760 ntBASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 AC153526.1-201ENSMUST00000219750 190 ntBASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Gm10268-201ENSMUST00000085340 555 ntBASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lhx6Q9R1R0 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lhx6Q9R1R0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lhx6Q9R1R0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lhx6Q9R1R0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Gm37785-201ENSMUST00000195783 2408 ntBASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Gm11331-201ENSMUST00000119764 288 ntBASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Gm13385-201ENSMUST00000121089 220 ntBASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Gm13874-202ENSMUST00000135348 941 ntTSL 3 BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Gm22906-201ENSMUST00000175191 250 ntBASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Gm27225-201ENSMUST00000183833 557 ntBASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Gm7631-201ENSMUST00000196935 1100 ntBASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Gm42783-201ENSMUST00000197075 795 ntBASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Gm8598-201ENSMUST00000221184 836 ntBASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Gm42905-201ENSMUST00000196237 1611 ntBASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.39□□□□□ -0.43
Lhx6Q9R1R0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms