Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.03□□□□□ -0.8
Smco4Q9JIS3 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Smco4Q9JIS3 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.02□□□□□ -0.8
Smco4Q9JIS3 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Smco4Q9JIS3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
Smco4Q9JIS3 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Gm17807-201ENSMUST00000186869 298 ntBASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Gm11873-201ENSMUST00000117877 1304 ntBASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
Smco4Q9JIS3 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco4Q9JIS3 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.01□□□□□ -0.81
Smco4Q9JIS3 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco4Q9JIS3 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco4Q9JIS3 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smco4Q9JIS3 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco4Q9JIS3 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco4Q9JIS3 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smco4Q9JIS3 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco4Q9JIS3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smco4Q9JIS3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco4Q9JIS3 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco4Q9JIS3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco4Q9JIS3 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smco4Q9JIS3 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Smco4Q9JIS3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco4Q9JIS3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco4Q9JIS3 Gm15770-201ENSMUST00000117498 584 ntBASIC10.01□□□□□ -0.81
Smco4Q9JIS3 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.01□□□□□ -0.81
Smco4Q9JIS3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC10.01□□□□□ -0.81
Smco4Q9JIS3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco4Q9JIS3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Smco4Q9JIS3 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms