Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.08□□□□□ -0.47
Ube4bQ9ES00 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ube4bQ9ES00 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ube4bQ9ES00 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Gm13385-201ENSMUST00000121089 220 ntBASIC12.08□□□□□ -0.48
Ube4bQ9ES00 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Gm24420-201ENSMUST00000176676 59 ntBASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Gm8927-201ENSMUST00000181978 981 ntBASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Gm3222-201ENSMUST00000071282 990 ntBASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ube4bQ9ES00 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Gm6912-201ENSMUST00000117218 544 ntBASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Gm38294-201ENSMUST00000192831 381 ntBASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Gm43703-201ENSMUST00000200523 763 ntBASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.07□□□□□ -0.48
Ube4bQ9ES00 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms