Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem54Q9D7S1 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Gm24231-201ENSMUST00000104315 133 ntBASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Gm13315-201ENSMUST00000120376 991 ntBASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Gm11597-201ENSMUST00000121423 964 ntBASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Gm14760-201ENSMUST00000121831 999 ntBASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Gm37489-201ENSMUST00000191883 159 ntBASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem54Q9D7S1 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tmem54Q9D7S1 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tmem54Q9D7S1 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tmem54Q9D7S1 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tmem54Q9D7S1 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tmem54Q9D7S1 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Gm12058-201ENSMUST00000118614 437 ntBASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Gm13297-201ENSMUST00000120205 934 ntBASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Mir1938-201ENSMUST00000158746 100 ntBASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Gm8227-201ENSMUST00000223306 571 ntBASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Morn2-202ENSMUST00000227729 656 ntBASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Tmem54Q9D7S1 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms