Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sf3a3Q9D554 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3a3Q9D554 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3a3Q9D554 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Sf3a3Q9D554 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3a3Q9D554 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3a3Q9D554 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3a3Q9D554 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.71□□□□□ -0.37
Sf3a3Q9D554 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.71□□□□□ -0.37
Sf3a3Q9D554 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3a3Q9D554 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Sf3a3Q9D554 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.71□□□□□ -0.37
Sf3a3Q9D554 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3a3Q9D554 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.71□□□□□ -0.37
Sf3a3Q9D554 Gm27772-201ENSMUST00000184900 187 ntBASIC12.71□□□□□ -0.37
Sf3a3Q9D554 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Sf3a3Q9D554 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.71□□□□□ -0.37
Sf3a3Q9D554 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.71□□□□□ -0.37
Sf3a3Q9D554 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.71□□□□□ -0.37
Sf3a3Q9D554 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3a3Q9D554 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3a3Q9D554 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3a3Q9D554 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Sf3a3Q9D554 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3a3Q9D554 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3a3Q9D554 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sf3a3Q9D554 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3a3Q9D554 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.71□□□□□ -0.38
Sf3a3Q9D554 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3a3Q9D554 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3a3Q9D554 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3a3Q9D554 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3a3Q9D554 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Sf3a3Q9D554 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
Sf3a3Q9D554 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3a3Q9D554 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3a3Q9D554 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sf3a3Q9D554 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm22065-201ENSMUST00000103753 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm22066-201ENSMUST00000103761 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm24932-201ENSMUST00000103763 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm24115-201ENSMUST00000103799 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm22190-201ENSMUST00000103827 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm22191-201ENSMUST00000103831 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm24721-201ENSMUST00000103849 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm28018-201ENSMUST00000103869 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm26399-201ENSMUST00000103937 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm12485-201ENSMUST00000119641 291 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm25349-201ENSMUST00000177728 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm23616-201ENSMUST00000177797 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm25871-201ENSMUST00000177816 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm24752-201ENSMUST00000178240 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm24496-201ENSMUST00000178287 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm25649-201ENSMUST00000178476 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm25548-201ENSMUST00000178681 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm23147-201ENSMUST00000178841 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm26095-201ENSMUST00000179270 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm22171-201ENSMUST00000179283 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm23936-201ENSMUST00000179354 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm22619-201ENSMUST00000179516 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm25255-201ENSMUST00000179579 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm24755-201ENSMUST00000179691 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm26506-201ENSMUST00000179692 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm25086-201ENSMUST00000179931 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm23243-201ENSMUST00000180047 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm24659-201ENSMUST00000180212 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm24169-201ENSMUST00000180244 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm23689-201ENSMUST00000180354 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm27359-201ENSMUST00000184153 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm27785-201ENSMUST00000184268 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm27466-201ENSMUST00000184396 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm27703-201ENSMUST00000184836 110 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Gm7774-201ENSMUST00000200064 533 ntBASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sf3a3Q9D554 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms