Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snf8Q9CZ28 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Snf8Q9CZ28 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snf8Q9CZ28 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snf8Q9CZ28 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Snf8Q9CZ28 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.95□□□□□ -0.34
Snf8Q9CZ28 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snf8Q9CZ28 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snf8Q9CZ28 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snf8Q9CZ28 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Snf8Q9CZ28 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snf8Q9CZ28 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Snf8Q9CZ28 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Snf8Q9CZ28 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Snf8Q9CZ28 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Gm8805-201ENSMUST00000117848 313 ntBASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Gm13123-201ENSMUST00000122173 492 ntBASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.94□□□□□ -0.34
Snf8Q9CZ28 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Gm15823-201ENSMUST00000064305 670 ntBASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Paupar-201ENSMUST00000194826 3482 ntBASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.94□□□□□ -0.34
Snf8Q9CZ28 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Gm22121-201ENSMUST00000175148 54 ntBASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snf8Q9CZ28 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 118.8 ms