Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
H2afb1Q9CQ70 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb1Q9CQ70 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
H2afb1Q9CQ70 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
H2afb1Q9CQ70 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
H2afb1Q9CQ70 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Snord83b-201ENSMUST00000104546 94 ntBASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Gm12384-201ENSMUST00000119228 919 ntBASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Gm14760-201ENSMUST00000121831 999 ntBASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Gm16296-201ENSMUST00000159905 325 ntBASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Gm4271-201ENSMUST00000174444 973 ntBASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Gm27331-201ENSMUST00000183705 60 ntBASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Gm24526-201ENSMUST00000082921 158 ntBASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
H2afb1Q9CQ70 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Gm24644-201ENSMUST00000157114 139 ntBASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Gm29705-201ENSMUST00000212598 474 ntBASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb1Q9CQ70 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
H2afb1Q9CQ70 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms