Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Gm12151-201ENSMUST00000121374 290 ntBASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Gm8227-201ENSMUST00000223306 571 ntBASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Gm16372-201ENSMUST00000073088 450 ntBASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Krt88Q9CPR6 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Krt88Q9CPR6 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.33□□□□□ -0.59
Krt88Q9CPR6 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.33□□□□□ -0.6
Krt88Q9CPR6 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Gm35960-201ENSMUST00000202712 767 ntBASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Gm44069-201ENSMUST00000204898 506 ntBASIC11.33□□□□□ -0.6
Krt88Q9CPR6 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Itm2b-204ENSMUST00000228637 783 ntBASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Krt88Q9CPR6 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms