Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Gm9630-201ENSMUST00000178304 885 ntBASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.18□□□□□ -0.46
Cstf3Q99LI7 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cstf3Q99LI7 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Pck2-205ENSMUST00000226352 2784 ntBASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Gm44124-201ENSMUST00000204159 472 ntBASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Gm19163-201ENSMUST00000223313 780 ntBASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Cstf3Q99LI7 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cstf3Q99LI7 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cstf3Q99LI7 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cstf3Q99LI7 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cstf3Q99LI7 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cstf3Q99LI7 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cstf3Q99LI7 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cstf3Q99LI7 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Cstf3Q99LI7 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cstf3Q99LI7 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.16□□□□□ -0.46
Cstf3Q99LI7 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cstf3Q99LI7 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.16□□□□□ -0.46
Cstf3Q99LI7 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cstf3Q99LI7 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cstf3Q99LI7 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cstf3Q99LI7 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.16□□□□□ -0.46
Cstf3Q99LI7 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cstf3Q99LI7 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cstf3Q99LI7 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cstf3Q99LI7 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms