Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.7□□□□□ -0.38
Cdk9Q99J95 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Gm21854-201ENSMUST00000179901 471 ntBASIC12.69□□□□□ -0.38
Cdk9Q99J95 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.69□□□□□ -0.38
Cdk9Q99J95 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.69□□□□□ -0.38
Cdk9Q99J95 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk9Q99J95 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Gm15376-201ENSMUST00000122258 783 ntBASIC12.68□□□□□ -0.38
Cdk9Q99J95 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.68□□□□□ -0.38
Cdk9Q99J95 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Gm5279-201ENSMUST00000199575 745 ntBASIC12.68□□□□□ -0.38
Cdk9Q99J95 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.68□□□□□ -0.38
Cdk9Q99J95 Gm26315-201ENSMUST00000083890 321 ntBASIC12.68□□□□□ -0.38
Cdk9Q99J95 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdk9Q99J95 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.68□□□□□ -0.38
Cdk9Q99J95 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdk9Q99J95 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdk9Q99J95 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.67□□□□□ -0.38
Cdk9Q99J95 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdk9Q99J95 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdk9Q99J95 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdk9Q99J95 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdk9Q99J95 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdk9Q99J95 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Cdk9Q99J95 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms