Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Mir1247-201ENSMUST00000116706 82 ntBASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Gm6023-201ENSMUST00000118217 606 ntBASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Gm7809-201ENSMUST00000153199 742 ntBASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Gm3890-201ENSMUST00000182416 207 ntBASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.18□□□□□ -0.3
Pcdha3Q91Y16 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Gm13492-201ENSMUST00000119772 665 ntBASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Gm24548-201ENSMUST00000158650 108 ntBASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Gm6222-202ENSMUST00000182143 629 ntBASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdha3Q91Y16 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Gm44124-201ENSMUST00000204159 472 ntBASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdha3Q91Y16 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms