Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Gm22058-201ENSMUST00000083393 310 ntBASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb1Q91Y08 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Gm24548-201ENSMUST00000158650 108 ntBASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhb1Q91Y08 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Gm11425-201ENSMUST00000119608 498 ntBASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Gm45925-201ENSMUST00000218882 744 ntBASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhb1Q91Y08 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms