Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm5904-201ENSMUST00000210286 865 ntBASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Gm45925-201ENSMUST00000218882 744 ntBASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Gm12314-201ENSMUST00000118104 538 ntBASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Gm18304-201ENSMUST00000189162 546 ntBASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb6Q91XZ4 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Gm5187-201ENSMUST00000117317 991 ntBASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Gm13342-201ENSMUST00000121055 207 ntBASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Gm23119-201ENSMUST00000158610 140 ntBASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Gm37008-201ENSMUST00000195712 319 ntBASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms