Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.47□□□□□ -0.09
Ddx41Q91VN6 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.47□□□□□ -0.09
Ddx41Q91VN6 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.46□□□□□ -0.09
Ddx41Q91VN6 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Gm15236-201ENSMUST00000117309 379 ntBASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Gm26083-201ENSMUST00000157904 193 ntBASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Gm18056-201ENSMUST00000207670 568 ntBASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Gm18061-201ENSMUST00000208350 562 ntBASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Gm18063-201ENSMUST00000208529 568 ntBASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Gm18052-201ENSMUST00000208750 559 ntBASIC14.46□□□□□ -0.09
Ddx41Q91VN6 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.46□□□□□ -0.09
Ddx41Q91VN6 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Ddx41Q91VN6 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ddx41Q91VN6 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ddx41Q91VN6 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Ddx41Q91VN6 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Ddx41Q91VN6 Gm44086-201ENSMUST00000203251 2349 ntBASIC14.46□□□□□ -0.1
Ddx41Q91VN6 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ddx41Q91VN6 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms