Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Gm12390-201ENSMUST00000117897 397 ntBASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Gm15824-201ENSMUST00000119516 955 ntBASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Gm11278-201ENSMUST00000121002 997 ntBASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Gm16958-202ENSMUST00000181792 830 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Gm27331-201ENSMUST00000183705 60 ntBASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Gm3052-201ENSMUST00000186409 829 ntBASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Gm29127-201ENSMUST00000188304 517 ntBASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Gm2788-205ENSMUST00000209849 933 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Gm18041-201ENSMUST00000218210 618 ntBASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 AC154417.1-201ENSMUST00000223876 476 ntBASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pcdhb17Q91VD8 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Gm12583-201ENSMUST00000120677 853 ntBASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Gm29649-201ENSMUST00000185649 419 ntBASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Gm45800-201ENSMUST00000210331 700 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 AC158631.2-201ENSMUST00000219999 478 ntBASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb17Q91VD8 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb17Q91VD8 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb17Q91VD8 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms