Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H1fooQ8VIK3 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Gm12363-201ENSMUST00000122250 668 ntBASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Gm7561-201ENSMUST00000211203 886 ntBASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Gm26035-201ENSMUST00000083065 308 ntBASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms