Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Mir7023-201ENSMUST00000185093 64 ntBASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Gm9063-201ENSMUST00000223299 582 ntBASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Map1b-203ENSMUST00000223725 2669 ntBASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Gm27390-201ENSMUST00000184516 176 ntBASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Gm26035-201ENSMUST00000083065 308 ntBASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa1Q8VEE4 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Gm9522-201ENSMUST00000182394 926 ntBASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Gm7063-201ENSMUST00000186840 981 ntBASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Gm5279-201ENSMUST00000199575 745 ntBASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.71□□□□□ -0.37
Rpa1Q8VEE4 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms