Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q8VDP2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q8VDP2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q8VDP2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Q8VDP2 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q8VDP2 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q8VDP2 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.26□□□□□ -0.45
Q8VDP2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Q8VDP2 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q8VDP2 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q8VDP2 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q8VDP2 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Q8VDP2 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q8VDP2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q8VDP2 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC12.26□□□□□ -0.45
Q8VDP2 CT868720.1-201ENSMUST00000223069 2544 ntBASIC12.26□□□□□ -0.45
Q8VDP2 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC12.26□□□□□ -0.45
Q8VDP2 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q8VDP2 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Q8VDP2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.25□□□□□ -0.45
Q8VDP2 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q8VDP2 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q8VDP2 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Q8VDP2 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q8VDP2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Q8VDP2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.25□□□□□ -0.45
Q8VDP2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Q8VDP2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Q8VDP2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.25□□□□□ -0.45
Q8VDP2 Gm5312-201ENSMUST00000203728 547 ntBASIC12.25□□□□□ -0.45
Q8VDP2 Gm5035-201ENSMUST00000215581 927 ntBASIC12.25□□□□□ -0.45
Q8VDP2 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.25□□□□□ -0.45
Q8VDP2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Q8VDP2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q8VDP2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q8VDP2 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Q8VDP2 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q8VDP2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.25□□□□□ -0.45
Q8VDP2 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Q8VDP2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q8VDP2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q8VDP2 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q8VDP2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.25□□□□□ -0.45
Q8VDP2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Q8VDP2 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Q8VDP2 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.25□□□□□ -0.45
Q8VDP2 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q8VDP2 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Q8VDP2 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Q8VDP2 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q8VDP2 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q8VDP2 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q8VDP2 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q8VDP2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.24□□□□□ -0.45
Q8VDP2 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q8VDP2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.24□□□□□ -0.45
Q8VDP2 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Q8VDP2 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.24□□□□□ -0.45
Q8VDP2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Q8VDP2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Q8VDP2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Q8VDP2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.24□□□□□ -0.45
Q8VDP2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.24□□□□□ -0.45
Q8VDP2 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q8VDP2 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.24□□□□□ -0.45
Q8VDP2 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.24□□□□□ -0.45
Q8VDP2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Q8VDP2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.24□□□□□ -0.45
Q8VDP2 Gm45161-201ENSMUST00000207316 2263 ntBASIC12.24□□□□□ -0.45
Q8VDP2 Gm9182-201ENSMUST00000217829 639 ntBASIC12.24□□□□□ -0.45
Q8VDP2 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.24□□□□□ -0.45
Q8VDP2 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q8VDP2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q8VDP2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q8VDP2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q8VDP2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q8VDP2 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Q8VDP2 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.24□□□□□ -0.45
Q8VDP2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q8VDP2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Q8VDP2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q8VDP2 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Q8VDP2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.24□□□□□ -0.45
Q8VDP2 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q8VDP2 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q8VDP2 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Q8VDP2 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Q8VDP2 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Q8VDP2 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q8VDP2 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.24□□□□□ -0.45
Q8VDP2 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q8VDP2 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Q8VDP2 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.24□□□□□ -0.45
Q8VDP2 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Q8VDP2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.23□□□□□ -0.45
Q8VDP2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms