Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Gm27731-201ENSMUST00000185192 107 ntBASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim29Q8R2Q0 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Gm45784-201ENSMUST00000188360 142 ntBASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Gm18584-201ENSMUST00000203098 964 ntBASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Gm5904-201ENSMUST00000210286 865 ntBASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Cog3-203ENSMUST00000227473 4197 ntBASIC14.37□□□□□ -0.11
Trim29Q8R2Q0 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Gm15703-201ENSMUST00000120250 880 ntBASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Gm38092-201ENSMUST00000195600 653 ntBASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim29Q8R2Q0 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim29Q8R2Q0 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms