Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Gm12957-201ENSMUST00000117835 377 ntBASIC12.43□□□□□ -0.42
Vps50Q8CI71 Gm14660-201ENSMUST00000119809 575 ntBASIC12.43□□□□□ -0.42
Vps50Q8CI71 Gm10156-201ENSMUST00000122364 462 ntBASIC12.43□□□□□ -0.42
Vps50Q8CI71 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Gm17420-201ENSMUST00000164753 153 ntBASIC12.43□□□□□ -0.42
Vps50Q8CI71 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Gm40466-201ENSMUST00000212174 422 ntBASIC12.43□□□□□ -0.42
Vps50Q8CI71 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.43□□□□□ -0.42
Vps50Q8CI71 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.43□□□□□ -0.42
Vps50Q8CI71 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps50Q8CI71 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.42□□□□□ -0.42
Vps50Q8CI71 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.42□□□□□ -0.42
Vps50Q8CI71 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.42□□□□□ -0.42
Vps50Q8CI71 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.42□□□□□ -0.42
Vps50Q8CI71 Gm12403-201ENSMUST00000121384 959 ntBASIC12.42□□□□□ -0.42
Vps50Q8CI71 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps50Q8CI71 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.42□□□□□ -0.42
Vps50Q8CI71 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.42□□□□□ -0.42
Vps50Q8CI71 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.42□□□□□ -0.42
Vps50Q8CI71 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.42□□□□□ -0.42
Vps50Q8CI71 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps50Q8CI71 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps50Q8CI71 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms