Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Gm13612-201ENSMUST00000119276 390 ntBASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Gm13829-201ENSMUST00000119600 138 ntBASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Gm6266-201ENSMUST00000203844 806 ntBASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc87Q8CDL9 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Gm8652-201ENSMUST00000181363 964 ntBASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccdc87Q8CDL9 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Gm5687-201ENSMUST00000118252 640 ntBASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Gm27847-201ENSMUST00000183711 107 ntBASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Gm27375-201ENSMUST00000183799 107 ntBASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms